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@article{MM_2014_26_11_a16, author = {O. F. Voropaeva and S. R. Senchukova and K. V. Brodt and K. E. Garbuzov and A. V. Melnitchenko and A. A. Starikova}, title = {Numerical simulation of ultradian oscillations in {p53-Mdm2-network} under stress conditions}, journal = {Matemati\v{c}eskoe modelirovanie}, pages = {105--122}, publisher = {mathdoc}, volume = {26}, number = {11}, year = {2014}, language = {ru}, url = {http://geodesic.mathdoc.fr/item/MM_2014_26_11_a16/} }
TY - JOUR AU - O. F. Voropaeva AU - S. R. Senchukova AU - K. V. Brodt AU - K. E. Garbuzov AU - A. V. Melnitchenko AU - A. A. Starikova TI - Numerical simulation of ultradian oscillations in p53-Mdm2-network under stress conditions JO - Matematičeskoe modelirovanie PY - 2014 SP - 105 EP - 122 VL - 26 IS - 11 PB - mathdoc UR - http://geodesic.mathdoc.fr/item/MM_2014_26_11_a16/ LA - ru ID - MM_2014_26_11_a16 ER -
%0 Journal Article %A O. F. Voropaeva %A S. R. Senchukova %A K. V. Brodt %A K. E. Garbuzov %A A. V. Melnitchenko %A A. A. Starikova %T Numerical simulation of ultradian oscillations in p53-Mdm2-network under stress conditions %J Matematičeskoe modelirovanie %D 2014 %P 105-122 %V 26 %N 11 %I mathdoc %U http://geodesic.mathdoc.fr/item/MM_2014_26_11_a16/ %G ru %F MM_2014_26_11_a16
O. F. Voropaeva; S. R. Senchukova; K. V. Brodt; K. E. Garbuzov; A. V. Melnitchenko; A. A. Starikova. Numerical simulation of ultradian oscillations in p53-Mdm2-network under stress conditions. Matematičeskoe modelirovanie, Tome 26 (2014) no. 11, pp. 105-122. http://geodesic.mathdoc.fr/item/MM_2014_26_11_a16/
[1] Ponsele V. S., Kupa S., Stork P.-A., Skhuntes B., Ingibitory vzaimodeistviya mezhdu Mdm2 i p53, Opisanie izobreteniya k patentu. RU 2 477 724. C2. 20.03.2013, byul. No 8, 2013, 90 pp.
[2] Lane D., Levine A., “p53 Research: The Past Thirty Years and the Next Thirty Years”, Cold Spring Harb. Perspect. Biol., 2:12 (2010), a000893 | DOI
[3] Kastan M. B., Onyekwere O., Sidransky D., Vogelstein B., Craig R. W., “Participation of p53 protein in the cellular response to DNA damage”, Cancer Res., 51 (1991), 6304–6311
[4] Lu X., Lane D. P., Different induction of transcriptionally active p53 following UV or ionizing radiation: defects in chromosome instability syndromes?, Cell, 75 (1993), 765–778 | DOI
[5] Haupt Y., Maya R., Kazaz A., Oren M., “Mdm2 promotes the rapid degradation of p53”, Nature, 387 (1997), 296–299 | DOI
[6] Moll U. M., Petrenko O., “The Mdm2-p53 Interaction”, Mol. Cancer Res., 2003, no. 1, 1001–1008 | MR
[7] Lahav G., Rosenfeld N., Sigal A., Geva-Zatorsky N., Levine A. J., Elowitz M. B., Alon U., “Dynamics of the p53-Mdm2 feedback loop in individual cells”, Nature Genetics, 36:2 (2004), 147–150 | DOI
[8] Abramenko I. V., Zavgorodnyaya A. V., Balan V. I., Kryachok I. A., Chumak A. A., “Induktsiya p53-zavisimogo apoptoza pod deistviem ioniziruyuschego izlucheniya v limfoidnykh kletkakh bolnykh v-kletochnym khronicheskim limfoleikozom”, Onkologiya, 10:2 (2008), 225–229 | Zbl
[9] Zheltukhin A. O., Chumakov P. M., “Povsednevnye i indutsiruemye funktsii gena p53”, Uspekhi biologicheskoi khimii, 50 (2010), 447–516
[10] Lev Bar-Or R., Maya R., Segel L. A., Alon U., Levine A. J., Oren M., “Generation of oscillations by the p53-Mdm2 feedback loop: A theoretical and experimental study”, PNAS, 97:21 (2000), 11250–11255 | DOI
[11] Tiana G., Jensen M. H., Sneppen K., “Time delay as a key to apoptosis induction in the p53 network”, Eur. Phys. J. B, 29 (2002), 135–140 | DOI
[12] Ciliberto A., Novak B., Tyson J. J., “Steady states and oscillations in the p53-Mdm2 network”, Cell cycle, 4:3 (2005), 488–493 | DOI
[13] Geva-Zatorsky N., Rosenfeld N., Itzkovitz Sh. et al., “Oscillations and variability in the p53 system”, Molecular Systems Biology, 2006, no. 2 | DOI
[14] Tiana G., Krishna S., Pigolotti S., Jensen M. H., Sneppen K., “Oscillations and temporal signalling in cells”, Phys. Biol., 4 (2007), R1–R17 | DOI
[15] Chickarmane V., Ray A., Sauro H. M., Nadim A. A., “Model for p53 Dynamics Triggered by Damage”, SIAM J. Applied Dynamical Systems, 6:1 (2007), 61–78 | DOI | MR | Zbl
[16] Horhat R. F., Neamtu M., Mircea G., “Mathematical models and numerical simulations for the P53-Mdm2 network”, Applied Sciences, 10 (2008), 94–106 | MR | Zbl
[17] Horhat R. F., Neamtu M., Opris D., “The qualitative analysis for a differential system of the P53-Mdm2 interaction with delay kernel”, 1st WSEAS International Conference on Biomedical Electronics And Biomedical Informatics, BEBI'08 (Rhodes, Greece, August 20–22, 2008)
[18] Batchelor E., Mock C. S., Bhan I., Loewer A., Lahav G., “Recurrent Initiation: A Mechanism for Triggering p53 Pulses in Response to DNA Damage”, Molecular Cell, 30 (2008), 277–289 | DOI
[19] Likhoshvai V. A., Golubyatnikov V. P., Demidenko G. V., Fadeev S. I., Evdokimov A. A., “Teoriya gennykh setei”, Sistemnaya kompyuternaya biologiya, SO RAN, Novosibirsk, 2008, 395–480
[20] Gaidov Yu. A., Golubyatnikov V. P., “Odna model gennoi seti, ispravlyayuschei povrezhdenie DNK”, Matematika v prilozheniyakh, Vserossiiskaya konferentsiya, priurochennaya k 80-letiyu akademika S. K. Godunova, Tez. dokladov (Novosibirsk, 20–24 iyulya 2009 g.), In-t matematiki SO RAN, Novosibirsk, 2009, 334
[21] Hamada H., Tashima Y., Kisaka Y., Iwamoto K., Hanai T., Eguchi Y., Okamoto M., “Sophisticated Framework between Cell Cycle Arrest and Apoptosis Induction Based on p53 Dynamics”, PlOS ONE, 4:3 (2009), e4795, 7 | DOI | Zbl
[22] Sun T., Chen C., Shen P., “Modeling the role of p53 pulses in DNA damage-induced cell death decision”, BMC Bioinformatics, 10 (2009), 190 | DOI
[23] Proctor C. J., Gray D. A., “Explaining oscillations and variability in the p53-Mdm2 system”, BMC Syst. Biol., 2 (2008), 75 | DOI
[24] Zhang T., Brazhnik P., Tyson J. J., “Exploring mechanisms of the DNA-damage response: p53 pulses and their possible relevance to apoptosis”, Cell Cycle, 6 (2007), 85–94 | DOI
[25] Wagner J., Ma L., Stolovitzky G. A., “p53-Mdm2 loop controlled by a balance of its feedback strength and effective dampening using ATM and delayed feedback”, Syst. Biol. (Stevenage), 152 (2005), 109–118 | DOI
[26] Qi J. P., Shao S. H., Zhu Y., “A mathematical model of P53 gene regulatory networks under radiotherapy”, Biosystems, 90:3 (2007), 698–706 | DOI
[27] Cai X., Yuan Z. M., “Stochastic modeling and simulation of the p53-MDM2/MDMX loop”, J. Comput. Biol., 16 (2009), 917–933 | DOI
[28] Jolma I. W., Ni X. Y., Rensing L., Ruoff P., “Harmonic Oscillations in Homeostatic Controllers: Dynamics of the p53 Regulatory System”, Biophysical Journal, 98 (2010), 743–752 | DOI
[29] Lahav G., Rosenfeld N., Sigal A., Geva-Zatorosky N., Levine A. J., Elowitz M. B., Alon U., “Dynamics of the p53-Mdm2 feedback loop in individual cells”, Nat. Genet., 36 (2004), 47–50 | DOI
[30] Schon O., Friedler A., Bycroft M., Freund S. M. V., Fersht A. R., “Molecular mechanism of the interaction between MDM2 and p53”, J. Mol. Biol., 323 (2002), 491 | DOI
[31] Voropaeva O. F., Shokin Yu. I., “Chislennoe modelirovanie v meditsine: Nekotorye postanovki zadach i rezultaty raschetov”, Vychislitelnye tekhnologii, 17:4 (2012), 29–55
[32] Voropaeva O. F., Shokin Yu. I., “Chislennoe modelirovanie obratnoi svyazi p53-Mdm2 v biologicheskom protsesse apoptoza”, Vychislitelnye tekhnologii, 17:6 (2012), 47–63