Geodesic
Trajectory analyzer of molecular dynamics
Matematičeskaâ biologiâ i bioinformatika, Tome 2 (2007) no. 1, pp. 120-129 
I. V. Likhachev; N. K. Balabaev. Trajectory analyzer of molecular dynamics. Matematičeskaâ biologiâ i bioinformatika, Tome 2 (2007) no. 1, pp. 120-129. http://geodesic.mathdoc.fr/item/MBB_2007_2_1_a11/
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     author = {I. V. Likhachev and N. K. Balabaev},
     title = {Trajectory analyzer of molecular dynamics},
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     pages = {120--129},
     year = {2007},
     volume = {2},
     number = {1},
     language = {ru},
     url = {http://geodesic.mathdoc.fr/item/MBB_2007_2_1_a11/}
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Voir la notice de l'article provenant de la source Math-Net.Ru

The TAMD program (Trajectory Analyzer of Molecular Dynamics) is presented. The program is designed for visualizing and finding of the simplest geometric or dynamic characteristics of trajectory files of molecular systems. The program is a convenient instrument for primary analysis of the structure and dynamic behavior of a macromolecule.

[1] Bernstein F. C., Koetzle T. F., Williams G. J. B., Meyer Jr. E. F., Brice M. D., Rodgers J. R., Kennard O., Shimanouchi T., et al., “Protein Data Bank: a computer-based archival file for macromolecular structures”, J. Mol. Biol., 112 (1977), 535–542 | DOI

[2] Programmnyi kompleks PUMA dlya modelirovaniya molekulyarnoi dinamiki polimerov i biopolimerov, tekhnicheskaya dokumentatsiya, IMPB RAN