Numerical algorithms for diffusion coefficient identification in problems of tissue engineering
Matematičeskaâ biologiâ i bioinformatika, Tome 11 (2016) no. 2, pp. 426-444.

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Identification algorithms of diffusion coefficients in a specimen with tomographic images of the solution penetration dynamics are considered. With the sensitivity operator, built on the basis of adjoint equations for diffusion process model, the corresponding coefficient inverse problem is reduced to the quasilinear operator equation which is then solved by the Newton-type method with successive evaluation of r-pseudo inverse operators of increasing dimensionality. The efficiency of the constructed algorithm is tested in numerical experiments. For comparison, a gradient-based algorithm for the inverse problem solution is considered.
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A. V. Penenko; S. N. Nikolaev; S. Golushko; A. V. Romashenko; I. A. Kirilova. Numerical algorithms for diffusion coefficient identification in problems of tissue engineering. Matematičeskaâ biologiâ i bioinformatika, Tome 11 (2016) no. 2, pp. 426-444. http://geodesic.mathdoc.fr/item/MBB_2016_11_2_a21/

[1] Murphy S. V., Atala A., “Organ engineering — combining stem cells, biomaterials, and bioreactors to produce bioengineered organs for transplantation”, Bioessays, 35 (2012), 163–172 | DOI

[2] Kirilova I. A., Sharkeev Yu. P., Nikolaev S. V., Podorozhnaya V. T., Uvarkin P. V., Ratushnyak A. S., Chebodaeva V. V., “Physicomechanical properties of the extracellular matrix of a demineralized bone”, AIP Conference Proceedings, 1760, 2016, 020027-1–020027-7 | DOI

[3] Penenko V. V., Metody chislennogo modelirovaniya atmosfernykh protsessov, Gidrometeoizdat, L., 1981, 352 pp.

[4] Alifanov O. M., Artyukhin E. A., Rumyantsev S. V., Ekstremalnye metody resheniya nekorrektnykh zadach, Nauka. Gl. red. fiz.-mat. lit., M., 1988, 288 pp.

[5] Vasilev F. P., Chislennye metody resheniya ekstremalnykh zadach, Nauka, M., 1988, 550 pp.

[6] Kabanikhin S. I., Gasanov A., Penenko A. V., “Metod gradientnogo spuska dlya resheniya obratnoi koeffitsientnoi zadachi teploprovodnosti”, Sib. zhurn. vychisl. matem, 11:1 (2008), 41–51 | DOI | Zbl

[7] Scherzer O., Grasmair M., Grossauer H., Haltmeier M., Lenzen F., Variational Methods in Imaging, Applied Mathematical Sciences, Springer, New York, 2009, 320 pp. | MR | Zbl

[8] Godunov S. K., Antonov A. G., Kirilyuk O. P., Kostin V. I., Garantirovannaya tochnost resheniya sistem lineinykh uravnenii v evklidovykh prostranstvakh, 2-e izd., pererab. i dop., Nauka, Novosibirsk, 1992, 360 pp.

[9] Cheverda V. A., Kostin V. I., “R-pseudoinverse for compact operators in Hilbert space: existence and stability”, J. Inverse and Ill-Posed Problems, 3:2 (1995), 131–148 | DOI | MR | Zbl

[10] Goldman N. L., “Obratnye zadachi s finalnym pereopredeleniem dlya parabolicheskikh uravnenii s neizvestnymi koeffitsientami pri starshei proizvodnoi”, Doklady Akademii nauk, 438:2 (2011), 162–167 | Zbl

[11] Marchuk G. I., “O postanovke nekotorykh obratnykh zadach”, Doklady AN SSSR, 156:3 (1964), 503–506 | Zbl

[12] Marchuk G. I., Chislennoe reshenie zadach dinamiki atmosfery i okeana, Gidrometeoizdat, L., 1974

[13] Penenko V. V., “Vychislitelnye aspekty modelirovaniya dinamiki atmosfernykh protsessov i otsenki vliyaniya razlichnykh faktorov na dinamiku atmosfery”, Nekotorye problemy vychislitelnoi i prikladnoi matematiki, ed. Lavrentev M. M., Nauka, Novosibirsk, 1975, 61–77

[14] Penenko A. V., “O reshenii obratnoi koeffitsientnoi zadachi teploprovodnosti metodom proektsii gradienta”, Sibirskie elektronnye matematicheskie izvestiya, 2010, Trudy pervoi mezhdunarodnoi molodezhnoi shkoly-konferentsii “Teoriya i chislennye metody resheniya obratnykh i nekorrektnykh zadach” Chast I, S.178–S.198

[15] Penenko A. V., “Chislennyi algoritm opredeleniya temperaturoprovodnosti sloistoi sredy na osnove singulyarnogo razlozheniya operatora chuvstvitelnosti modeli teploprovodnosti”, Sibirskie elektronnye matematicheskie izvestiya, 8, Trudy vtoroi mezhdunarodnoi molodezhnoi shkoly-konferentsii “Teoriya i chislennye metody resheniya obratnykh i nekorrektnykh zadach” Chast II (2011), 320–339

[16] Hasanov A., DuChateau P., Pektas B., “An adjoint problem approach and coarse-fine mesh method for identification of the diffusion coefficient in a linear parabolic equation”, Journal of Inverse and Ill-Posed Problems, 14:5 (2006), 435–463 | DOI | MR | Zbl

[17] Gokhberg I. Ts., Krein M. G., Vvedenie v teoriyu lineinykh nesamosopryazhennykh operatorov, Nauka, M., 1965, 448 pp. | MR

[18] Kaltenbacher B., “Some Newton-type methods for the regularization of nonlinear ill-posed problems”, Inverse Problems, 13:3 (1997), 729–753 | DOI | MR | Zbl

[19] GNU Scientific Library Reference Manual Edition 2.2.1, for GSL Version 2.2.1, (accessed 25.10.2016) https://www.gnu.org/software/gsl/manual/html_node/