DAGmaps: Space Filling Visualization of Directed Acyclic Graphs
Journal of graph algorithms and applications,
Special Issue on Selected Papers from the Fifteenth International Symposium on Graph Drawing, GD 2007
, Tome 13 (2009) no. 3, pp. 319-347
Cet article a éte moissonné depuis la source Journal of Graph Algorythms and Applications website
Gene Ontology information related to the biological role of genes is organized in a hierarchical manner that can be represented by a directed acyclic graph (DAG). Space filling visualizations, such as the treemaps, have the capacity to display thousands of items legibly in limited space via a two-dimensional rectangular map. Treemaps have been used to visualize the Gene Ontology by first transforming the DAG into a tree. However this transformation has several undesirable effects such as producing trees with a large number of nodes and scattering the rectangles associated with the duplicates of a node around the display rectangle. In this paper we introduce the problem of visualizing a DAG with space filling techniques without converting it to a tree first, we present two special cases of the problem, and we discuss complexity issues.
Keywords:
Directed Acyclic Graph (DAG), Two Terminal Series Parallel Digraph, Space Filling Visualization, Treemap, DAGmap, Gene Ontology
@article{JGAA_2009_13_3_a2,
author = {Vassilis Tsiaras and Sofia Triantafilou and Ioannis Tollis},
title = {DAGmaps: {Space} {Filling} {Visualization} of {Directed} {Acyclic} {Graphs}},
journal = {Journal of graph algorithms and applications},
pages = {319--347},
year = {2009},
volume = {13},
number = {3},
doi = {10.7155/jgaa.00190},
language = {en},
url = {http://geodesic.mathdoc.fr/articles/10.7155/jgaa.00190/}
}
TY - JOUR AU - Vassilis Tsiaras AU - Sofia Triantafilou AU - Ioannis Tollis TI - DAGmaps: Space Filling Visualization of Directed Acyclic Graphs JO - Journal of graph algorithms and applications PY - 2009 SP - 319 EP - 347 VL - 13 IS - 3 UR - http://geodesic.mathdoc.fr/articles/10.7155/jgaa.00190/ DO - 10.7155/jgaa.00190 LA - en ID - JGAA_2009_13_3_a2 ER -
%0 Journal Article %A Vassilis Tsiaras %A Sofia Triantafilou %A Ioannis Tollis %T DAGmaps: Space Filling Visualization of Directed Acyclic Graphs %J Journal of graph algorithms and applications %D 2009 %P 319-347 %V 13 %N 3 %U http://geodesic.mathdoc.fr/articles/10.7155/jgaa.00190/ %R 10.7155/jgaa.00190 %G en %F JGAA_2009_13_3_a2
Vassilis Tsiaras; Sofia Triantafilou; Ioannis Tollis. DAGmaps: Space Filling Visualization of Directed Acyclic Graphs. Journal of graph algorithms and applications, Special Issue on Selected Papers from the Fifteenth International Symposium on Graph Drawing, GD 2007 , Tome 13 (2009) no. 3, pp. 319-347. doi: 10.7155/jgaa.00190
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